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qual_score_per_read: Calculate the mean quality score per read of the FASTQ gzipped file

Description

Calculate the mean quality score per read of the FASTQ gzipped file

Usage

qual_score_per_read(infile)

Arguments

Argument Description
infile A string giving the path for the fastqfile

Value

mean quality per read

Examples

r infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq") qual_score_per_read(infile)$q50_per_position[1:10]