RefChef


List of Genome References available on URSA Stronghold and CCV's Oscar.

Escherichia_coli_K12

Escherichia coli K12

ENSEMBL BACTERIA

primary

Genbank_UniVec_2018_11_28

Universal Vectors

NCBI

primary

Genbank_bacteria_all_2018_11_20_15_34_part1

Multiple Bacteria

NCBI

primary

Genbank_bacteria_all_2018_11_20_15_34_part2

Multiple Bacteria

NCBI

primary

Genbank_bacteria_all_2018_11_20_15_34_part3

Multiple Bacteria

NCBI

primary

OM-RGC

na

HTTP://OCEAN-MICROBIOME.EMBL.DE

primary

broad_bundle_hg19

Homo sapiens

BROAD INSTITUTE

primary

cdubliniensis_cd36

Candida dubliniensis CD36

HTTP://WWW.CANDIDAGENOME.ORG

primary

drosophila-melanogaster-bdgp6rel9

Drosophila melanogaster

ENSEMBL

primary

grch37_release87

Homo sapiens

ENSEMBL

primary

primary

grch38_release98

Homo sapiens

ENSEMBL

primary

grcm38_p5

Mus musculus

ENSEMBL

primary

cdna-transcriptome

grcm38_p6

Mus musculus

ENSEMBL

primary

nr_db

na

NCBI

blast_db

nt_db

na

NCBI

blast_db

pr2_db

na

PR2

db

refseq_genomic

na

REFSEQ

blast_db

refseq_protein

na

REFSEQ

blast_db

refseq_rna

na

REFSEQ

blast_db

rnor60

Rattus norvegicus

ENSEMBL

primary

primary

saccer3

Saccharomyces cerevisiae

ENSEMBL

primary

silva_arbfiles

na

ARB-SILVA.DE

arb_files

spur31

Strongylocentrotus purpuratus

ENSEMBL METAZOA

primary

spur42

Strongylocentrotus purpuratus

REFSEQ

primary

spur50

Strongylocentrotus purpuratus

REFSEQ

primary

uniprot

na

UNIPROT.ORG

primary

wbps8_ws256

Caenorhabditis elegans

WORMBASE_PARASITE

primary

cdna-trandscriptome