qual_score_per_read: Calculate the mean quality score per read of the FASTQ gzipped file
Description
Calculate the mean quality score per read of the FASTQ gzipped file
Usage
qual_score_per_read(infile)
Arguments
| Argument | Description |
|---|---|
infile |
A string giving the path for the fastqfile |
Value
mean quality per read
Examples
r
infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
qual_score_per_read(infile)$q50_per_position[1:10]